Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRHFETTRRIVIKVGTSSLVQTSGKINLSKIDHLAFVISSLMNRGMEVILVSSGAMGFGLDILKMDKRPQEISQQQAVSSVGQVAMMSLYSQIFSHYQTHVSQILLTRDVVVFPESLQNVTNSFESLLSMGILPIVNENDAVSVDEMDHKTKFGDNDRLSAVVAKITKADLLIMLSDIDGLFDKNPNIYDDAVLRSHVSEITDDIIKSAGGAGSKFGTGGMLSKIKSAQMVFDNNGQMILMNGANPRDILKVLDGHNIGTYFAQGK
2W21 Chain:A ((4-255))
-------SQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATA-I----KVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAG---------GMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQ-
General information:
TITO was launched using:
RESULT:
Template:
2W21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157862 for 2017 contacts (-78.3/contact) +
2D Compatibility (PS) -26180 + (NN) -11302 + (LL) 712
1D Compatibility (HY) -16000 + (ID) 4200
Total energy: -214832.0 ( -106.51 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_2W21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W21-query.scw
PDB file :
Tito_Scwrl_2W21.pdb
: