Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYIEILGQNAKKASQSVARLSTASKNEILRDLARNIVADTETILTENARDVAKAKDNGISEIMVDRLRLNK-DRIQAIANGIYQVADLADPIGQVVSGYTNLDGLKILKKRVPLGVIAMIFESRPNVSVDAFSLAFKTGNAIILRGGKDAI--FSNTALV--NCMRQTLQDTGHNPDIVQLVEDTSHVVAEELMQATDYVDVLIPRGGAKLIQTVKEKSKIPVIETGVGNVHIYIDEFADLDMAAKIVINAKTQRPSVCNAAEGLVVHQAIAKGFLSQLEKMLKESNQSVEFRAD---------------EEALQLLENAVAASESDYATEFLDYIMSVKVVDSFEQAISWINKYSSHHSEAIITNNISRAEIFQDMVDAAAVYVNASTRFTDGFVFGLGAEIGISTQKLHARGPMGLEALTSTKYYINGTGQVRE |
| 1VLU Chain:A ((19-443)) | ------IAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETR--V--SDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTN----CNAMETLLINPKFSK-WWEVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAIQC-KTV-------------SLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFAD----------------------VGLDGLVSYQYQIRGDGQVAS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182979 for 2964 contacts (-61.7/contact) +
2D Compatibility (PS) -39630 + (NN) -17487 + (LL) 3456
1D Compatibility (HY) -26000 + (ID) 6900
Total energy: -269540.0 ( -90.94 by residue)
QMean score : 0.507
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