Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQASTTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFYQIDK--GNKSMPIDYIRKNGFFVKESAFPQVPYLDIIEEKLLGGDYN
1ZP7 Chain:A ((34-195))
-----------------------------TLEDDLNETNKYYLTNQIAVIHKKPTPVQIVN-------------AYFKQSSTTDYNGIYKGRYIDFEAKETKNKTSFPLQNFHDHQIEHMKQVKAQDGICFVII--SAFDQVYFLEADKLFYFWDRKEKNGRKSIRKDELEETAYPISLGYAPRIDYISIIEQLYFS----
General information:
TITO was launched using:
RESULT:
Template:
1ZP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92437 for 1089 contacts (-84.9/contact) +
2D Compatibility (PS) -15769 + (NN) -4336 + (LL) 3512
1D Compatibility (HY) -16400 + (ID) 3800
Total energy: -129230.0 ( -118.67 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_1ZP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZP7-query.scw
PDB file :
Tito_Scwrl_1ZP7.pdb
: