Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANDWKKSARGLALMTLEEVFDKGAYSNIALNKSLKKSRLSDKDRALVTEIVYGTVARKITLEWYLSHFIVDRDKLELWVYHLLLLSLYQLLYLDNIPDHAIVNDAVTIAKNRGNKKGAEKLINAVLRRVSSETLPEIASIKRQNKRYSVAYSMPVWLVKKLIDQYGETRALAIMESLFERNK-ASLRVTDLSQKQTIKETLN---------VRDSHIAETALVADSGNFASTSFFQDGLITIQDESSQLVAPTLKVSGNDQVLDACSAPGGKTSHIASYLTT-GAVTALDLYDHKLELVMENAKRLGLSDKIKTKKLDASKAHEYFLEDTFDKILVDAPCSGIGLIRRKPDIKYNKANQDFEALQEIQLSILSSVCQTLRKGGIITYSTCTIFEEENFQVIEKFLENHPNFEQVELSHTQEDIVKRGCISISPEQYHTDGFFIGQVKRIL |
| 2YXL Chain:A ((155-442)) | -------------------------------------------------------------------------------------------------------------------------------------------------------YLAPSWLIERVKGILGDETE-DFFRSVNKRHEWISIRVNTL--KANVEEVIGELEEDGVEVVRSERVPTILKIKGPYNFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKI-VKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPLKSPYDPGFLEGTMRAWPHRHSTIGFFYALLEK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YXL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92368 for 2317 contacts (-39.9/contact) +
2D Compatibility (PS) -29512 + (NN) -13008 + (LL) 12820
1D Compatibility (HY) -15200 + (ID) 4250
Total energy: -141518.0 ( -61.08 by residue)
QMean score : 0.394
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