Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKHHYFLAFFYGSVIIFAICFVIIDSLGVNLVHLYQTSRLWLIEQLIFSIFFLSLAVTILLLLTWFLLDDNSKRQINHNLRRILNNQSINVTDDGTEISTNIQRLSKKMNLMTASLQSKENSRILKSQEIVK-QERKRIARDLHDTVSQDLFAASMVLSGIAQNVSQLDVDQVGSQLLAVEEMLQHAQNDLRILLLHLRPVELENKTLSEGFKMILKELTDKSDIEVVYHESILTLPKKIE---DNIFRIG-QEFISNTLKHSQASRLEVYLNQTENELQLKMIDNGIGFDMDSVYDLSYGLKNIEDRVEDLAGNLQLLSQPDKGVAMDIRLPLVNQNEDKNG |
| 3GIF Chain:A ((16-214)) | -------------------------------------------------------------------------------------------------------------------------NERI---AELVKLEERQRIARDLEDTLGQKLSLIGLK-SDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELIN------IKQILEAADIMFIYEEE--KWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGE-------HGLLGMRERLEFANGSLHI--DTENGTKLTMAIPNN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36947 for 1208 contacts (-30.6/contact) +
2D Compatibility (PS) -20140 + (NN) -10983 + (LL) 13220
1D Compatibility (HY) -10800 + (ID) 2800
Total energy: -68450.0 ( -56.66 by residue)
QMean score : 0.490
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