Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIGLFCAAGFSTGMLVNNMKIAADKEGIEAHIEAYSQGKIADYAKDLDVALLGPQVSYTLDKSKSICDEYGVPIAVIPMADYGMLDGVKVLKLALSLLETRKEA
2WY2 Chain:D ((4-91))
---IYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNK--PVEVIDSLLYGKVDGLGVLKAAVAAIKKAAA-
General information:
TITO was launched using:
RESULT:
Template:
2WY2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77768 for 646 contacts (-120.4/contact) +
2D Compatibility (PS) -9429 + (NN) -1654 + (LL) 560
1D Compatibility (HY) -8400 + (ID) 1700
Total energy: -98391.0 ( -152.31 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_2WY2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WY2-query.scw
PDB file :
Tito_Scwrl_2WY2.pdb
: