Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIQEIKDLMTQFDESSLREFSFKTSDGELSFSKNEGKAPLVPTMSPMSHQPEATPTIATPVSNEAGEQTKQATEVVSEIPESTVTVAEGDVVESPLVGVAYLASGPDKPNFVSVGDSVKKGQTLMIIEAMKVMNEVPAPHDGVVTEILVANEEVIEFGKGLVRIK
3BDO Chain:A ((80-156))
-----------------------------------------------------------------------------------------GHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE
General information:
TITO was launched using:
RESULT:
Template:
3BDO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51368 for 544 contacts (-94.4/contact) +
2D Compatibility (PS) -7916 + (NN) 2012 + (LL) 5460
1D Compatibility (HY) -8800 + (ID) 1700
Total energy: -62312.0 ( -114.54 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_3BDO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BDO-query.scw
PDB file :
Tito_Scwrl_3BDO.pdb
: