Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEQIKLSKSDRQKVWWRSQFLQGSWNYERMQNMGWAYALIPALKKLYTTKEDRAAALERHMEFFNTHPYVAAPIIGVTLALEEEKASGTPVEDKAIQGVKIGMMGPLAGIGDPVFWFTVRPILGALGASLASAGNILGPIIFFVGWNLIRMSFLWYTQELGYKSGKEITKDMSGGILQDITKGASILGMFILAVLVKRWVAINFTVDLPKKTLSEGAYINFPKDHVSGQQLHDILGQVQSGLSLDKMQPQTLQGQLDSLIPGLAGLLLTFFCMWLLKKKVSPITIIIGLFIVGILARLAGVM |
| 2HKO Chain:A ((479-532)) | -----------------------------------------------------------------------------------------------AVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGEL------FLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGA------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15420 for 219 contacts (-70.4/contact) +
2D Compatibility (PS) -5294 + (NN) 2184 + (LL) 9380
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -16000.0 ( -73.06 by residue)
QMean score : -0.350
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