Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVKLFAIHLFFIVISFGIKYYHLQGPNLIWNMTLALIALDFAYLTSLFKKKILIGLFALAWFFFYPNTFYMLTDIIHMHFVGDVLYNKTNLILYILYVSSILFGFLSGIESFSVIMRKFRISNIFLRWGIIGIVSFVSSFGIHIGRYARLNSWDILTKPQVVINELLAVPSRDSFHFILGFTFLQVLCLIFMDYSAGKKLEK |
3BMA Chain:A ((339-356)) | -----------------------------------------------------------------DGGEPFFMKDTIHLGWLGWLAFDKAVDPFLSNPTPAPTYHLNERFFSKDWATYDGDVKEF------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BMA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9089 for 73 contacts (-124.5/contact) +
2D Compatibility (PS) -1729 + (NN) 1040 + (LL) 13356
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 1778.0 ( 24.36 by residue)
QMean score : -0.414
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