Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQAETLTSLEQVLKQIKYSLDSYYSFCVKKGFVLKVIPVRENIEEVSYLLNMIESQKDTEISTYYVDKLSKQLKEFVKKLNSWEVKPLFTSEQLSKLTTYSTFLENKE
5BV1 Chain:A ((318-365))
------------------------------------------NFAIVGSLLNTVARRLKSDYESRHNTKTTAELKEFVKKL------PGYQAEQQSLKIHSNIAEEIIN
General information:
TITO was launched using:
RESULT:
Template:
5BV1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2679 for 225 contacts (11.9/contact) +
2D Compatibility (PS) -4983 + (NN) -815 + (LL) 4364
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -855.0 ( -3.80 by residue)
QMean score : 0.234
(partial model without unconserved sides chains):
PDB file :
Tito_5BV1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5BV1-query.scw
PDB file :
Tito_Scwrl_5BV1.pdb
: