Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDNKKLLITGKILLAILYIIVLFAVCVLAAMAFLSLFGSKLLDVDFFTLFLSDGIFKGGLMLGIVFFLVVLDASI |
3WDS Chain:A ((11-19)) | -SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 0 for 15 contacts (0.0/contact) +
2D Compatibility (PS) -1071 + (NN) -15 + (LL) 208
1D Compatibility (HY) -400 + (ID) 150
Total energy: -1428.0 ( -95.20 by residue)
QMean score : 0.568
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