Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTETIYKLILKDGLRQIKFKNSHLKLVSSAEEGKRGAIFAYRSKANMIKARGLVLTSMEAVSENQDSFTHWTPNVYRYGSYSDSKRQITRGHSEDNLRQVNTFYIDFDITSSAEEMTSGDILTAAIDLGFMPTLILKSDKGYQAYFVLSEPAYVTSHSQFRVVKVAKAISQNLRNYFSQTLPVDMTCNHFGIARMPRTDNIEFFHADYTYSFQEWLDWSMKQSDIPFPSKKPNLTVISGSEGVKQVDEPWYGLLMREANIKGDKALMGRNNVLFTLALANFSSGVSQSDCEVVLADFNEHLAEPLSQDEFLKVIYSAYSGKYEAANRDYIKLLCKAWVNENLRNSDLFIKQRWYKFKKNRANRKNSHLHEWKADVMAYLEGYFQSDDPFIQTTKKAIREELNIPERSLDKVLKALKAD-NKIFFAVKSGRGGGIRLTSVKAIVLSLIQVKKERQEAYFANVAAFFEESLGFIKRVIEGVKSGLKQAKQLSLFEADIG |
2VRO Chain:A ((299-360)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIRRAF-VPEAALEPVLEALKAKLAKI--TVGNPRNDAVRMGSL---------VSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1160 for 241 contacts (4.8/contact) +
2D Compatibility (PS) -6749 + (NN) -3933 + (LL) 28024
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: 10402.0 ( 43.16 by residue)
QMean score : 0.347
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