Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYVIFSFEEGDYLCDNKDKLLIFESRGLAYQYMQKHYLKPIPLQK--TKRIMYPMSYYQAPFKVQQVC
4HMY Chain:A ((38-86))
-----FREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHL
General information:
TITO was launched using:
RESULT:
Template:
4HMY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7188 for 273 contacts (-26.3/contact) +
2D Compatibility (PS) -4674 + (NN) -641 + (LL) 760
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -15893.0 ( -58.22 by residue)
QMean score : -0.006
(partial model without unconserved sides chains):
PDB file :
Tito_4HMY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HMY-query.scw
PDB file :
Tito_Scwrl_4HMY.pdb
: