Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNKFLLVSIVFIIIFVVQPQNFQSLKNIFTQNDIASQLNISSSPEEKNDGLGTAYQTQNEDLKSKSFDGQHQVIVVNEKAQFTAEELSMRNGSWEKYDNLDFLNRVGVAEAMLGKELMPKEARQDISSVKPTGWKNKKITFNGKQDYLYNRSHLIGFQLSGENANVKNLFTGTRALN----ANFND-DKSSMVYYENEVANYIK-KTNHHVRYRVTPLFKNVELVARGVRIEAQSIE-----------------DETISFDVYIFNGQPGYDIDYLTGSSEKIMITK |
2XGR Chain:A ((67-248)) | -----------------------------------------------------------------------------------------------------LDNLNRATFSHIQLQDRHETKDVRTKI--------------------WVMNRGHLVGYQFCGLNDEPRNLVAMTAWLNTGAYSGANDSNPEGMLYYENRLDSWLALHPDFWLDYKVTPIYSGNEVVPRQIELQYVGIDSSGELLTIRLNSNKESIDENGVTTVILENSAPNINLDYLNGTATP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32284 for 962 contacts (-33.6/contact) +
2D Compatibility (PS) -14444 + (NN) -498 + (LL) 8128
1D Compatibility (HY) -11200 + (ID) 2300
Total energy: -52598.0 ( -54.68 by residue)
QMean score : 0.307
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