Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLYFPSISEETFDFEAD---WLVKAMDDNQKRILFVGQGKNGDLELELNYQDNPEPFDNLSVGELVQLPKELFVVPETISYQPQYECF
2BJH Chain:A ((39-88))
--------EKIYNAQTDINGWILR--DDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVK
General information:
TITO was launched using:
RESULT:
Template:
2BJH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3397 for 175 contacts (19.4/contact) +
2D Compatibility (PS) -5231 + (NN) -5254 + (LL) 968
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -9720.0 ( -55.54 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_2BJH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BJH-query.scw
PDB file :
Tito_Scwrl_2BJH.pdb
: