Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEENAQQPSLRGKSRRERVEFARSRDILDVAHELNMELFRDGKNYRWKEHDSMVITPATNQWYWFSQRQGGDVIALVETIKEIGFNQAFEYLNEGTFKEFTVVNQVKEPFSYYLEPYEQLFVEARRYLKENRGLSDDTIDFFYDKGVLAQANAKVGDMIEPVLVFKNLDKNGQVVGAALQGLVAAPDKYFGRGYLKQIMKNSQPYNGMHVDIGTPNRLVFAESSIDLMSYYEIHKDSLSDVRLVSLEGLKTGTIGRHLIQLRAEMERRPLSSSWTDEILAQGLDEAVKQGYFKDGKNSHLLTLAVDNDVKGKQLIEELKDKSIPVIDATPPKAEGQSKMDWNAYLQETKATFSTEKYQEKIDHLISDVILGDETYYLWHDDELVNLGAGDSIIQAFHHQLEDRRYVINQAELYVEESSNDGATGYLSIEGHVLDKDGISDYLSDQALTDAEKVAFLETLQTELPDIWDEIVNHYDKVFEEVVVKYGLREKHADIIQEQELDLDPLVVPEAKEKSLEMNQETNTGGELFNRNSSFLGEDSPGTAPQPVEPTAQPDFPTNVRLHFTTDDGNMSNKAFRKNMRTLNLYANTMRDSAQWYLSEIADTTMSYVYKTPHEEGVQVLSVHFGKKNWMHLTGVTPVYENWVDSLSEQFIDDIANSKGHFKNLKFALGTPDKLKVLNLLPEIIESDTFVFNDLSSVQKLNNLDLSQALNPEDSDLLLLFRDEGLHQVPASLMRIKGDLEERLSHIDSGTVLGVYRERNGQLEQVSVNEEYVKDSGQEMLSILQNKHYEEALDSGQEMVQTDGFSAEDFTKVLDAVYHVGVPDDLARVPEGVLPVWQKYLEVSEENQWDLEQMIDYADKNSLLVKDSAFYKEWKEDMIYKNDYHVRLQFAENWDNGVELPFRTEQLIDYKTFVTGLYEANQAHHQRRQESQLPYTKTEFDIYAPGGQLIKDNVHYAIGDETRPVSQLMGLGYRRLPGYQELAVIDNSILSQLENKELNQEIASEANEHSLNSQEIPKEDNYPREAFTSPKQDIKKGLAQRVEEIVAEDATKILVSSIPQVQENLSVEGNLVGTPQADNRMLYTNLEDFGQDYQLELAVYSPKRVDFLEDVQAPWTLALIRKEKKIGYLAYGSDWAKEFQIEEELEHLAAQIGDEKVPEGLYKQAEVEAFIASHQGNESLQEPIPTIVAEPFDYTSASAYEISEHAFQKIREYTQSPEDLLEYMDFMSKFPQLSPRNVALIHEQWRGANAVATYEQWKAMGEALGIKPDDVVQTKATYVNKRTGETKEVVHQGLSVKTGEKSKITLFRPLMVKMIPVLDENGQQLKNDKGNPKYKKLSEASLQEKALVKDGK------LPVRQFQERDSKTGQPRFTTYKV---FELSQTTLKPGSYPKAMP----NRHFNFNVDKVKTKEVLEGLCDYAEKIGVSLMKDDAHVLDNAKGAFYSEEQLILINPNNTPGEKIATTIHELAHATLHNPKLEKQYKELPKGQKEFEAEMTSYLLSKHFGLDTSEKAIHYMASWTDNLKALEDKQLADSLKRVHQTVSKMLKQVEKYTNPHQLGRGKEHGLNFPKAPTKGSSR |
| 3A5D Chain:D ((275-373)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMPDDDRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVSDQLYSAYANGVDIRKLVAIIGEDALTENDRRYLQFADAFERFFINQGQQNRSIEESLQIAWALLSMLPQGELKRISKDHIGKYY------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 39259 for 429 contacts (91.5/contact) +
2D Compatibility (PS) -9104 + (NN) -6051 + (LL) 93500
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: 113454.0 ( 264.46 by residue)
QMean score : 0.276
|
|
|