Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQKNNRLGYFGRQKQAFDDYVFLTKAKMKAERDYFASEGESDPERLAAQKARDQEFLKSLKKVGIGFIAFLLFYAIVRTVLGLW
3B07 Chain:B ((179-209))
-------------QVSAYDQYLFAQDPTGPAARDYFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATYAYV
General information:
TITO was launched using:
RESULT:
Template:
3B07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 435 for 118 contacts (3.7/contact) +
2D Compatibility (PS) -3060 + (NN) -647 + (LL) 460
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -4962.0 ( -42.05 by residue)
QMean score : 0.117
(partial model without unconserved sides chains):
PDB file :
Tito_3B07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B07-query.scw
PDB file :
Tito_Scwrl_3B07.pdb
: