Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFQTNYIHLADEILSGKTSISYEQALEILNSDENWWEIYAAALYLKNQVSRNNIRLNVLLSAKQGLCAENCGYCSQSKESTADIDKFGLLPQNVILKQAIVAHQNGASVFCIAMSGTKPSKREIEQLCQVIPEIKKSLPLEICLTAGFLDREQLHQLKQAGIDR--INHNLNTPEENYPNIATTHSFKDRCDTLERIHNEDIDVCSGFICGM-GESDEGLITLAFRLKELNPYSIPVNFLLAVEGTPLGKYNYLTPIKCLKIMAMLRFVFPFKELRLSAGREVHFENFESLVTLLVDSTFLGNYLTEGGRNQHTDIEFLEKLQLNHTKKELI
3CIX Chain:A ((62-261))------------------------------------------------------------------VCRKNCLYCGLRRDN-KNLKRYRMTPEEIV-ERARLAVQFGAKTIVL-QSGEDPYYMP-DVISDIVKEIKK-MGVAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHR-KLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITLRCGANVIMPNWTPSPYRQLYQLYPGKICVFEKDTACIPC


General information:
TITO was launched using:
RESULT:

Template: 3CIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110352 for 1477 contacts (-74.7/contact) +
2D Compatibility (PS) -21748 + (NN) -12659 + (LL) 5772
1D Compatibility (HY) -10800 + (ID) 2400
Total energy: -152187.0 ( -103.04 by residue)
QMean score : 0.431

(partial model without unconserved sides chains):
PDB file : Tito_3CIX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CIX-query.scw
PDB file : Tito_Scwrl_3CIX.pdb: