Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFQTNYIHLADEILSGKTSISYEQALEILNSDENWWEIYAAALYLKNQVSRNNIRLNVLLSAKQGLCAENCGYCSQSKESTADIDKFGLLPQNVILKQAIVAHQNGASVFCIAMSGTKPSKREIEQLCQVIPEIKKSLPLEICLTAGFLDREQLHQLKQAGIDR--INHNLNTPEENYPNIATTHSFKDRCDTLERIHNEDIDVCSGFICGM-GESDEGLITLAFRLKELNPYSIPVNFLLAVEGTPLGKYNYLTPIKCLKIMAMLRFVFPFKELRLSAGREVHFENFESLVTLLVDSTFLGNYLTEGGRNQHTDIEFLEKLQLNHTKKELI |
3CIX Chain:A ((62-261)) | ------------------------------------------------------------------VCRKNCLYCGLRRDN-KNLKRYRMTPEEIV-ERARLAVQFGAKTIVL-QSGEDPYYMP-DVISDIVKEIKK-MGVAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHR-KLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITLRCGANVIMPNWTPSPYRQLYQLYPGKICVFEKDTACIPC |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -110352 for 1477 contacts (-74.7/contact) +
2D Compatibility (PS) -21748 + (NN) -12659 + (LL) 5772
1D Compatibility (HY) -10800 + (ID) 2400
Total energy: -152187.0 ( -103.04 by residue)
QMean score : 0.431
|
|
|