Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKIKIVTDSSITIEPELIKELDITVVPLSVMIDGTLYSDNDLKAQGEFLNLMRGSKELPKTSQPPVGVFAEIYEKLMNEGAEHIIAIHLTHTLSGTI-EASRQGANIAGADVTVIDSTFTDQCQKFQVVEAAKLAKEGA-DLDTILARVEEVRQKSELFIGVSTLENLVKGGRIGRVTGLLSSLLNIKVIMELTNHELVPIVKGRGL-KTFSKWLDNFVESAQTRKIAEIGISYCGKADMANNFKEKLAVLGAPISVLET--GSIIQTHTGEDAFAVMVRYE |
| 3FYS Chain:A ((37-310)) | ---IAVVTDSTAYIPKEMREQHQIHMIPLQVVFREETYREEIELDWKSFYEEVKKHNELPTTSQPPIGELVALYEEL-GKSYDAVISIHLSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGFYALKAAELIKNGASSPEDIIKELEEMKKTVRAYFMVDDLAHLQRGGRLSSAQAFIGSLLKVKPILHFDNKVIVPFEKIRTRKKAISRIYELLDEDASKGLPMRAAVIHANREEEAAKIIEELSAKYPHVEFYNSYFGAVIGTHLGEGALGICWCFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133571 for 2265 contacts (-59.0/contact) +
2D Compatibility (PS) -29141 + (NN) -12298 + (LL) 452
1D Compatibility (HY) -18000 + (ID) 3900
Total energy: -196458.0 ( -86.74 by residue)
QMean score : 0.467
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