Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYREITAVE-HDRFVSESNQTNLLQSSNWPKVKDNWGSQLLGFFDGETQI-ASASILIKSLPLGFSMLYIPRGPIMDYSNLDIVTKVLKD-LKAFGKKQRALFIKCDPLIYLKMVNAKDFENSPDEKEGLIAIDHLQRAGADWTGRTTDLAHTIQPRFQANLYANQF-----GLDKMSKKTRQAIRTSKNKGVDIQFG-SHELLEDFAELMKKTEDRKGINLRGIDYYQKLLDTYPNNSYITMASLDVAKRLEKIEKECQIAQSERIKSLELNREKKVKQHQGTIDRLNKEIDFLKEAQKAYDRDIIPLAATLTLEFGNTSENIYAGMDDYFKSYSAPIYTWFETAQRAFERGNIWQNMGGIENDLS-GGLYHFKSKF-EPIIEEFIGEFNIPVNRLLYKASNYVYALRKKRNS |
| 1P4N Chain:A ((10-321)) | ------AVERYEEFMRQSPYGQVTQDLGWAKVKNNWEPVDVYLEDDQGAIIAAMSMLLGDTPTDKKFAYASKGPVMDVTDVDLLDRLVDEAVKAL--DGRAYVLRFDP-----EVAYSDEFNTTLQDHGYVT---RNRNVAD-----AGMHATIQPRLNMVLDLTKFPDAKTTLDLYPSKTKSKIKRPFRDGVEVHSGNSATELDEFFKTYTTMAERHGITHRPIEYFQRM-----------QAAFD--------------ADTMRIFVAE--REGKL------------------------------LSTGIALKYGRKIWYMYAGSMD-GNTYYAPYAVQSEMIQWALDTNTDLYDLGGIESESTDDSLYVFKHVFVKDAPREYIGEIDKVLDPEVYAELVKD--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39168 for 2376 contacts (-16.5/contact) +
2D Compatibility (PS) -31561 + (NN) -4230 + (LL) 6764
1D Compatibility (HY) -18000 + (ID) 4850
Total energy: -91045.0 ( -38.32 by residue)
QMean score : 0.380
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