Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKGLLVMDVDSTLIMEEAIDLLAIEAGVGKQVAALTDAAMRGELDFEEALKKRVALLKGLPVTILTDILSSIHFTPGAYELIKECHKRQMKVGLVSGGFHETIDILAKQLQVDYVKANRLGVKGGFLTGEVEGEIVTKEVKKIKLKEWASENHLDLSQTIAMGDGANDLPMIKSAGVGIAFCAKPIVREEAAYQINEKNLLKVFDIIDANEN
1L7M Chain:A ((5-210))
--KKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKADICIEKRDLREILKYIK----
General information:
TITO was launched using:
RESULT:
Template:
1L7M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129156 for 1826 contacts (-70.7/contact) +
2D Compatibility (PS) -22336 + (NN) -9633 + (LL) 504
1D Compatibility (HY) -20000 + (ID) 4650
Total energy: -185271.0 ( -101.46 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_1L7M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L7M-query.scw
PDB file :
Tito_Scwrl_1L7M.pdb
: