Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIWDAYDQYGFITGLTLNRDQNIPQGLFHLVVDVILFHEDGDVLMMKRHPKKKAFPAYFEATAGGSALKGENAKQAILRELKEETGIVPQCLTFLNREWFSERSYFVDHFIAKYNGAKDIITL-QEGETVDYIWLKPEYIDLFLSKNKLIPSQIKLLKSLI
2O5F Chain:A ((36-145))
-------------------------------VVNAFLRNSQGQLWIPRR-------PNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPLASFSPFQTTLSSFMCVYELRSDATPIFNPNDISGGEWLTPEHLLARIAAGEAAKGDLAELVRRC
General information:
TITO was launched using:
RESULT:
Template:
2O5F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32356 for 709 contacts (-45.6/contact) +
2D Compatibility (PS) -10701 + (NN) -2410 + (LL) 2312
1D Compatibility (HY) -800 + (ID) 1250
Total energy: -45205.0 ( -63.76 by residue)
QMean score : 0.278
(partial model without unconserved sides chains):
PDB file :
Tito_2O5F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O5F-query.scw
PDB file :
Tito_Scwrl_2O5F.pdb
: