Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRKQFIKLGIATLLTVISLYTPINLATNHTTENIVTAQEYKTKENGTLPFKHKRQLVLGELDDKGRATFAHIQLKVKDEPKKKRVKRLKTT---PVGWHNFKFYYNDGTQKAWLMSRGRLICH----QFSGLNNERKNLVPMTNWLNTGNYNSTNSSNPESMLFYEKQLKTWLSTHKNYYLDYKVTPIYQNN-ELIPRKIELKYVGIDKTGKLLPIFIGNKSTQDQFGISTVTLENTSPNATIDYLSGKAQNTVLSAKEQRKLIAKHEEEKRLAEKKVEEEKAAAETQKKLEEEQARLAAEAQRKQKEEQARLAAETQKKQETLVQEQTSQGYKRDYRGRWHRPNGQYASKAEIAAAGLQW |
| 4QGO Chain:A ((53-221)) | ---------------------------------------------------------VQNTIDNQQRPSTANAML---DRTIRQYQNRR---NWKPLGWH--QVATNDHYGHA--VDKGALIAYALAGNFKGWDASVSN--PQNVVTQTAHSNQSNQKINRGQNYYESLVRK--AVDQNKRVRYRVTPLYRNDTDLVPFAMHLEAKSQDGTLEF-----------------NVAIPNTQASYTMDYATGEITLN------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7371 for 1157 contacts (-6.4/contact) +
2D Compatibility (PS) -16777 + (NN) -7537 + (LL) 17064
1D Compatibility (HY) -4000 + (ID) 2250
Total energy: -20871.0 ( -18.04 by residue)
QMean score : 0.389
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