Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIISLGEVLLRLSPPQYHTLMQANHLKCQFGGSELNVLASLAQLGHHVGLVSALPDNDLGKMARQFILSQQISPAAIIKKEGRLGIYYYEQGFSVRTNKVIY-DRNYSSFWESTLSDYDFTSIFKGVDWFHVSGITPALTKDLYEVTRFLMTKAKEGGVKVSIDLNFRESLWSSFQE--AREQLSPLLGLLDVCFGLEPIYLAGESEDLKDELG-LSRPYLDIELLE-KITQKIVQEYGLDYIAFTQREMEYTNQYMLKSYLYHNNMLYQTDKTGVEVLDRVGTGDAFAAGLIHALLEKETPQRALEIAMATFKYKHTIQGDINIMTRDDIAYLIEKETNDIKR |
| 3KTN Chain:A ((4-338)) | --KIAAFGEVMLRFTPPEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVF--------GSRRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTRSHS-QNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDIPLTTVKQVNHVLEHPNIDLIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158162 for 2784 contacts (-56.8/contact) +
2D Compatibility (PS) -36201 + (NN) -15407 + (LL) 1028
1D Compatibility (HY) -22000 + (ID) 5600
Total energy: -236342.0 ( -84.89 by residue)
QMean score : 0.473
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