Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIELGITTFGETTILEETNQSYSHPERIRQLVAEIELADQVGLDVYGIGEHHREDFAVSAPEIVLAA---GAVRTNNIRLSSAVTILSSNDPIRVYQQFSTIDALSNGRAEIMAGRGSFIESFPLFGYDLADYDDLFNEKMDMLLAINSATNLDWKGHLTQTVNERPIYPRA-------LQRQLPIWVATGGNVDSTIRIAEQGLPIVYATIGGNPKAFRQLVHIYKEVGSRNGHKPEQLKVAAHSWGWIEEDNQTAID---------------------------RYFFPTKQTVDNIAKGRPHWSEMTKEQYLRSVGPEGAIFVGSPEVVAHKIIGLVEALELDRFMLHLPVGSMPHKDVLNAIKLYGKEVAPIVRKYFEKN |
| 1BRL Chain:A ((16-353)) | ----------------------SQTEVMKRLVNLGKASEGCGFDTVWLLEHHFTEFGLLGNPYVAAAHLLGATETLNV--GTAAIVLPTAHPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFRVFGTDMDNSRALMDCWYDLM---KEGFN---EGYIAAD-NEHIKFPKIQLNPSAYTQGGAPVYV-VAESASTTEWAAERGLPMILSWIINTHEKKAQL-DLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRAKDICRNFLGHWYDSYVNATKIFDDSDQTKGYD-----------------DTNRRIDYSYEINP-----VGTPEECIAIIQQDIDATGIDNICCGFEANG-SEEEIIASMKLFQSDVMPYLKEKQ--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1BRL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -100577 for 2151 contacts (-46.8/contact) +
2D Compatibility (PS) -30169 + (NN) -3714 + (LL) 4988
1D Compatibility (HY) -14400 + (ID) 3550
Total energy: -147422.0 ( -68.54 by residue)
QMean score : 0.438
|
|
|