Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTGIIEEMGQVSRIRNGIKSQQLSIDAPKLVPLLRKGDSVAVNGVCLTVL---DKSETA--FIADVMPESMMRTSLAALRLHSKVNLELALRSDSRLGGHFVLGHVDGVGKIEKIQKDDIAVRFSIDAPPSIMSYIIEKGSVALDGISLTVVSFTEHSFEVSVIPHTMAQTNLSLKKVGDLLNIEVDVLGKYAEKFLAPTNRTNHTSSVMDWSFLSENGY
4FXU Chain:A ((1-197))
MFTGIITDIGKVDRVKPLNEGVLLRIETAYDPETIELGASIACSGVCLTVVALP------RWFEVEAWEEALRLTTISSWQSGRKINLERSLKLGDEMGGHLVFGHVDGQAEIVERKDEGDAVRFTLRAPEELAPFIAQKGSVALDGTSLTVNGVNANEFDVLLIRHSLEVTTWGERKAGDKVNIEIDQLARYAARLAQY---------------------
General information:
TITO was launched using:
RESULT:
Template:
4FXU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119528 for 1454 contacts (-82.2/contact) +
2D Compatibility (PS) -19130 + (NN) 5055 + (LL) 1360
1D Compatibility (HY) -13600 + (ID) 3600
Total energy: -149443.0 ( -102.78 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_4FXU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FXU-query.scw
PDB file :
Tito_Scwrl_4FXU.pdb
: