Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITSIVFDVDDTIYDQQAPYRIAVEKCFPDF-DMSAINQAYIRFRHYSDIGFPRVMAGEWTTEY----FRFWRCKETLLEFGYREIDEATGIYFQ--EIYEHELENITMLDEMRMTLDFLKSKNVPMGIITNGPTEHQLKKVKKLGLYDYVDPKRVIVSQATGFQKPEKEIFNLAAEQFDMNPSTTLYVGDSYDNDIMGAFNGGWHSMWFNHRGRSLKPGIKPVYDVAIDNFEQLFGAVKVLFDLPDNKFIFDINDKSNPVLEMGLNNGLMMAAERLLESNMSVDKVVILLRLTAKQEKVLRMKYAR |
3VAY Chain:A ((1-222)) | MIKLVTFDLDDTLWDT-APAIVGAEAALRDWLAEQAPKLGPVPVEHLWEIR-SRLLDEDPSFKHRISALRRRVLFHALEDAGY-DSDEAQQLADESFEVFLHGRHQVQIFPEVQPTLEIL-AKTFTLGVITNGNAD-----VRRLGLADYF--AFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLP--DAEIHNLSQLPEVLARWA---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117220 for 1643 contacts (-71.3/contact) +
2D Compatibility (PS) -23019 + (NN) -11048 + (LL) 5844
1D Compatibility (HY) -10400 + (ID) 3200
Total energy: -159043.0 ( -96.80 by residue)
QMean score : 0.383
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