Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKKNKIKKTLVDQILDKAKIEHDSLQLDALQGDLPNGIQKQDIFKTLALI--GDKTGPIIGILPLTEHLSEKKLAKISGNKKVQMIPQKDLQKITGYIHGANNPIGIRQKHNYPIFIDTIALEKQELIVSAGEIGRSIRINSEVLADFVNAKFADIKE |
1DBX Chain:A ((38-155)) | -------------------------------------GIDPNRSFKTLLVAENGDQKKLACFVLATANMLNLKKAAKSIGVKKVEMADKDAAQKSTGYLVGGISPLG--QKKRVKTVINSTALEFETIYVSGGKRGLSVEIAPQDLAKVLGAEFTDIVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DBX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11250 for 873 contacts (12.9/contact) +
2D Compatibility (PS) -12024 + (NN) 134 + (LL) 2760
1D Compatibility (HY) 3600 + (ID) 750
Total energy: 4970.0 ( 5.69 by residue)
QMean score : 0.183
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