Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNK-TMTDSHFDHILDELKPGDALVMNNTRVLPARLYGEKPDTHGHIELLLLKNTEGDQWEVLAKPAKRLRVGTKVSFGDGR-------LIATVTKELEHGGRIVEFSYDGIFLEVLESLGEMPLPPYIHEKLEDRDRYQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEMHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKPGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFVK |
| 1WDI Chain:A ((7-344)) | -----YDYHLPPEQIAQEGVEPRDMARLMVVYREGPFRVAHKRVRDLPEFLRPGDVLVFNESKVIPARLLARKP-TGGKVEILLVRER------ALLGPARKAPPGTRLLLLSPKDLAPVPGLQAEVVAVEED------------LVAHLEEVGEVP--------------------------AAPTAGLHFTPELLERLREMGVELRFLTLHVGPGTFRP----------MHAEPYAIPEEVAEAVNRAKAEGRRVVAVGTTVVRALESAYREGVG-VVAGEGETRLFIRPPYTFKVVDALFTNFHLPRSTLLMLVAAFLGRERTLEAYRLAVAEGYRFYSLGDAMLIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173413 for 2166 contacts (-80.1/contact) +
2D Compatibility (PS) -29658 + (NN) -3400 + (LL) 2704
1D Compatibility (HY) -26000 + (ID) 6850
Total energy: -236617.0 ( -109.24 by residue)
QMean score : 0.468
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