Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIWTNLGRFAFIETEHVNLRPVAYTDREAFWRIASKRTNLQFIFPVQTSKKESDFLLVHSFMKEPLGVWAIEDKVSHKMFGVIRFENIDLSKKTAEIGYFLKESSWGQGIMTECLKTLSFFAFQEFGMDKLIIVTHKENIASQKVALKAHFKQSRSFKGSDRYTRRIRDYIEFQLTRGDYRYE
1S7K Chain:A ((74-160))
---------------------------------------------------------------------------CQNEMAGVLSFNAIEPINKAAYIGYWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAEYLNGDYHDVNMYARIIDAD---
General information:
TITO was launched using:
RESULT:
Template:
1S7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37910 for 504 contacts (-75.2/contact) +
2D Compatibility (PS) -9523 + (NN) -2735 + (LL) 6512
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: -49106.0 ( -97.43 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_1S7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S7K-query.scw
PDB file :
Tito_Scwrl_1S7K.pdb
: