Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDAKFDFAKLLVYKAGQFIKSEMQNTFDVEEKSRFDDLVTSLDKKTQKLLIQEIIQHYPDDNILAEEDDVRSPIAQGN-VWVLDPIDGTVNFIVQKDNFAVMLAYYEEGVGQFGIIY-DVMADILYSGGGHFDVYANDKKIVPFQECPLERCLLGVNSAMYAENDCGIAHLASETLGVRIYGGAGISMAKVMQGKLLAYFSY-IQPWDYAAAKIMGETLGFTLLTLDGEEPNYSTRQKVMFLPKSKLNLIQSYLTKK |
2P3V Chain:A ((3-225)) | ---RLDFSIKLLRKVGHLLMIHWGRVDNVEKKTGFKDIVTEIDREAQRMIVDEIRKFFPDENIMAEE----GIFEKGDRLWIIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAPALNETLYAEEGS-GAFFNGERIRVSENASLEEC-VGSTGSYVDFTGKFIERMEKRTRRIRILGSAALNAAYVGAGRVDFFVTWRINPWDIAAGLIIVKEAGGMVTDFSGKEANAFSKNFIFSNGLIHDEVVKVVNEVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125339 for 1821 contacts (-68.8/contact) +
2D Compatibility (PS) -23645 + (NN) -8878 + (LL) 724
1D Compatibility (HY) -16400 + (ID) 3500
Total energy: -177038.0 ( -97.22 by residue)
QMean score : 0.432
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