Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATIKEIKAILETIVDLKDKRWQEYQTDSRAGVQKAILQRKKNIQSDLDEEARLEQMLVYEKKLYIEHINLIAGIDEVGRGPLAGPVVAAAVILPPNCKIKHLNDSKKIPKKKHQEIYQNILDQALAVGIGIQDSQCIDDINIYEATKHAMIDAVSHLSVAPEHLLIDAMVLDLSIPQTKIIKGDANSLSIAAASIVAKVTRDKIMSDYDSTYPGYAFSKNAGYGTKEHLEGLQKYGITPIHRKSFEPIKSML
3O3H Chain:A ((4-191))
--------------------------------------------------------------ELYKKEFGIVAGVDEAGRGCLAGPVVAAAVVLEK--EIEGINDSKQLSPAKRERLLDEIMEKA-AVGIGIASPEEIDLYNIFNATKLAMNRALENLSVKPSFVLVNGKGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELL
General information:
TITO was launched using:
RESULT:
Template:
3O3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119687 for 1621 contacts (-73.8/contact) +
2D Compatibility (PS) -20072 + (NN) -2913 + (LL) 6312
1D Compatibility (HY) -19600 + (ID) 4600
Total energy: -160560.0 ( -99.05 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_3O3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O3H-query.scw
PDB file :
Tito_Scwrl_3O3H.pdb
: