Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MCAFFKTDTLKSCAIDQNAGSKKSATLQIARRVKKGIGDFPKTEKGNSLIVGYPQIGLSPFLFSHVSGHVLRLPENKSTELWEDCQILNKGHCVEMRK |
3PBP Chain:C ((15-32)) | --------------------------VGLAMNTKKQIGDFFKNLNM---------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PBP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 843 for 63 contacts (13.4/contact) +
2D Compatibility (PS) -1745 + (NN) 749 + (LL) 4424
1D Compatibility (HY) -1200 + (ID) 400
Total energy: 2671.0 ( 42.40 by residue)
QMean score : 0.413
|
|
|