Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYQEALEWIHSKLAFGIKPGLERMRWMLEQLGNPQNNLSAIHVVGTNGKGSTTSYLQHIFTNSGYQVGTFTSPYIVDFRERISIDGQMIPESDFIKLVETVRPVVERLHLETNLEPATEFEVITVLMFYYFGNSCPVDIVIIEAGMGGYYDSTNMFKALAVTCPSIGLDHQEVLGRTYVDIAEQKVGVLKKGVPFVYANDRQDVEEVFQIKAKETHSQTYRLHNDFYIKEEE-----NYFNYIGPQANIDHIQLQMPGHHQVSNASIAITTSLLL--RDKYPKLTLQTIKDGLEMTKWVGRTELI--FPNVMIDGAHNNESVDALVQVIKKYQQKNVHILFAAINTKPIESMLESLSS------IAPVSVTSFDYPKSINLDKYPKAYTRVSD-WKKWL-HDINLTSDKDFYVITGSLYFISQVRQELLLIKTTTT |
| 2GCA Chain:A ((1-424)) | MNYTETVAYIHSFPRLAKTGDHRRILTLLHALGNPQQQGRYIHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERLQQQQADFNVTEFEFITALGYWYF-RQRQVDVAVIEVGIGGDTDSTNVITPVVSVLTEVALDHQKLLGHTITAIAKHKAGIIKRGIPVVTGNLVPDAAAVVAAKVATTGSQWLRFDRDFSVPKAKLHGWGQRFTYEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWP-LTPQNIRQGLAASHWPARLEKISDTPLIVIDGAHNPDGINGLITALKQLFSQPITVIAGIL----YAAMADRLTAAFSTVYLVPVPGT----PRAL----------RLKDSWQEALAASLNDVPDQPI-VITGSLYLASAVRQTLLG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -263952 for 3329 contacts (-79.3/contact) +
2D Compatibility (PS) -42036 + (NN) -13499 + (LL) 988
1D Compatibility (HY) -28400 + (ID) 7300
Total energy: -354199.0 ( -106.40 by residue)
QMean score : 0.528
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