Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVLISAYKGQDNNFATLYSTVTGGNLSQVGVFSLGIGPMMTTMILLRLFTI------------GKYSSGVSQKVQQFRQNVVMLVIAIIQGLAIA-----------ISFQYHNGFSLTKLLLATMILVTGAYIISWIGNLNAEYGFGGMTILVVVGMLVGQFNNIPLIF-ELFQDGY--QLAIILFLLWTLVAMYLMITFERSEYRIPVMRT--SIHNRLV--DDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIFPTNPDITSYNDYFSLSSIQGVVIYMILMLVLSVAFTFVNIDPTKISEAMRESGDFIPNYRPGKETQSYLSKICYLFGTFSGFFMAFLGGVPLLFALGNDDLRTVSSMTGIFMMITGMSFMILDEFQVIRIRKQYTSVFENEEN |
| 3DL8 Chain:G ((8-425)) | -----LFELKELRQKFIFTLLMFVIYRLGSHIPIPGIN-----------FALYDIFSGGNLGRLTVFALGVMPYISASIMMQLLTVAIPSLQRLAKEEGDYGR---YKINEYTKYLTLFV-ATVQSLGIAFWIRGQVSPKGIPVVENPGISF--ILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIFAGIVANFPNAVIQFYEKVKTGDIGPLTLLLIIALIIAIIVGIVYVQEAERRIPIQYPGRQVGRQLYAGRKTYLPIKINPAGVIPIIFAQALLLIPSTLLNFVQ-----NPFIKVIADMFQPGAIFYNFLYVTFIVFFTYFYTAVLINPVELAENLHKAGAFIPGVRPGQDTVKYLERIINRLIFFGALFLSVIALIPILISVWFNIPFYFGGTTA--LIVVGVALDTFRQIETYLIQKKYKSYVR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253982 for 2588 contacts (-98.1/contact) +
2D Compatibility (PS) -38157 + (NN) -3072 + (LL) 2252
1D Compatibility (HY) -45600 + (ID) 1500
Total energy: -340059.0 ( -131.40 by residue)
QMean score : 0.097
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