Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKVVLVTGCASGIGYAQAQYFLKQGYQVYGVDKSDK--------PNLNGNFNFIKLDLS-----SDLSPLFTMVPTVDILCNTAGILDAYKPLLEVSDEELEHLFDINFFVTVRLTRHYLRRMVEKKSGIIINMCSIASFIAGGGGAAYTSSKHALAGFTRQLALDYAKDCIQIFGIAPGAVQTAMTASDFEPGGLAEWVASETPIGRWTKPSEVAELTGFLASGKARSMQGEIVKIDGGWSLK
3UF0 Chain:A ((32-270))
--RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVLVNNAGII-ARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLAS
General information:
TITO was launched using:
RESULT:
Template:
3UF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153098 for 1907 contacts (-80.3/contact) +
2D Compatibility (PS) -24346 + (NN) -9517 + (LL) 184
1D Compatibility (HY) -8000 + (ID) 3750
Total energy: -198527.0 ( -104.10 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_3UF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UF0-query.scw
PDB file :
Tito_Scwrl_3UF0.pdb
: