Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVGDKAKIKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKENKKNLIPLEKTYLAPIRIYSEKVKSLKKLKKGATIAIPNDATNGSRALYVLQSAGLIKLNVSGKKVATVANITSNKKDINIQELDASQTPRALKDVDAAIINNTYIEQANLKPS-DAIFVEKSDKNSKQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEVKKVIKDTSADIPQW |
4K3F Chain:A ((32-230)) | --------------------------------------------------------------LKIKEFTDYVQPNVQVSEKRLDANFFQHQPYLDEFNKAKGTDLVAVTGVHIEPLGAYSSKYKKLDELPSGATVVIPNDATNGGRALLLLDKAGVIKLKDNKSITATPKDIVDNPKNIKIRELEAATLPRVLTQVDMALINTNYALEAKLNPTKDALAIEGSD---SPYVNILVARPD---NKDSDAMQKLAKALHSAEIKQFIQEKYKGAVVP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43207 for 1515 contacts (-28.5/contact) +
2D Compatibility (PS) -20533 + (NN) -1016 + (LL) 5100
1D Compatibility (HY) -15600 + (ID) 4200
Total energy: -79456.0 ( -52.45 by residue)
QMean score : 0.387
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