Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEELFCIGCGARIQTENKDAAGYTPRAALEKGLETGELYCQRCFRLRHYNEITDVHITDDEFLKLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFVAGNDVLLVGNKKDILPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGVTNVGKSTLINAIIREITGSRDVITTSRFPGTTLDKIEIPLDDGSYIFDTPGIIHRHQMAHYLTAKNLKYVS-PKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGFTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVSDFPKLVRHEFTIKNKMDIVYSGLGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI |
| 3CNL Chain:A ((47-208)) | ---------------------------------------------------------------------------------------------------KETIILLNKVDI-----ADEKTTKKWVEFFKKQGKR-----VITTHKGEPRKVLLKKLSFDRLAR-VLIVGVPNTGKSTIIN----KLKGKRA-----------KGIQWFSLENGVKILDTPGILYKNIFSEDLAAKLLLVGSLPVERIE--------DQRIFERAFEIFARSIGIESSFSEFFEDFARKRGLLKKGGVPDIERALMLFFTEVAQGKAGRVSFERPEDI--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23082 for 912 contacts (-25.3/contact) +
2D Compatibility (PS) -16345 + (NN) -6249 + (LL) 11144
1D Compatibility (HY) -8000 + (ID) 2400
Total energy: -44932.0 ( -49.27 by residue)
QMean score : 0.305
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