Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNETLLLHGIQLILIIAMIITFYQIVRHIRSQKINPFKRFFTGLWIGFVTDALDTLGIGSFATTTTFFKLTKLVEDDRKIPATMTAAHVLPVLLQSLCFIFVVKVEALTLITMAGAAFIGAFVGAKMTKNWHAPTVQRILGTLLITAAIIMLYRMITNPGAGISDSVHGLHGIWLFVGIVFNFIIGVLMTMGLGNYAPELIFFSLMGLSPAVAMPVMMLDAAMIMTASSTQFIKSGRVNWNGFAGLVTGGILGVIVAVLFLTNLDLNSLKTLVVGIVLFTGAMLIRSSFKKTMPKSHH |
| 3QO5 Chain:A ((184-227)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVFLNQALINYG--LLFLSSKGYVPLQA-PVMMNKEVMAKTAQLSQFDEELYKVIDGEDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGAWGIFRVHAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15281 for 172 contacts (-88.8/contact) +
2D Compatibility (PS) -4604 + (NN) -30 + (LL) 17336
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -6779.0 ( -39.41 by residue)
QMean score : -0.327
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