Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNHQILQNYINSHNLPIIEKDYHKY-LTFESLE-EDYTYILKDGIVKQSVLSKYGTEFNLRYVTGLEITSILNTDYSQHMGEPYNVRIESETAHFYKVRRSTFLKDINNDIELQGYVKDFYHNRLEKSMKKMQCMLTNGRIGAISTQLYDLSKMFGEERDNGDIYINFVITNEELGKFCGISTGSSVSRILKQLKDDHIIRIEKQHIIITNVEKLKDHIVF |
1OMI Chain:A ((28-228)) | ----------------IKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGY-YNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQEL---------SAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51380 for 1321 contacts (-38.9/contact) +
2D Compatibility (PS) -19948 + (NN) -930 + (LL) 724
1D Compatibility (HY) -14000 + (ID) 2750
Total energy: -88284.0 ( -66.83 by residue)
QMean score : 0.413
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