Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLLVVEDEKSIAEAIQALLADKGYSVDLAFDGDDGLEYILTGLYDLVLLDIMLPKRSGLSVLKRVREAGLETPIIFLTAKSQTYDKVNGLDLGADDYITKPFEADELLARIRLRTRQSSLIRANQ--LRLGNIRLNTDSHELESKESSVKLSNKEFLLMEVFMRNAKQIIPKNQLISKVWGPSDNSEYNQLEVFISFLRKKLRFLKADI-EIITTKGFGYSLEERT
4KFC Chain:A ((6-223))
--VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWS-AVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHS---APDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITATGIGYRFML--
General information:
TITO was launched using:
RESULT:
Template:
4KFC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118730 for 1559 contacts (-76.2/contact) +
2D Compatibility (PS) -22845 + (NN) -10452 + (LL) 1112
1D Compatibility (HY) -17200 + (ID) 3600
Total energy: -171715.0 ( -110.14 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_4KFC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KFC-query.scw
PDB file :
Tito_Scwrl_4KFC.pdb
: