Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRTYQPSKIRRQRKHGFRHRMSTKNGRRVLASRRRKGRKVLSA
2K0Q Chain:A ((44-54))
---------------------METRDGTKIIMKGNEIFRLDEAL
General information:
TITO was launched using:
RESULT:
Template:
2K0Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -505 for 34 contacts (-14.9/contact) +
2D Compatibility (PS) -1076 + (NN) 555 + (LL) 1468
1D Compatibility (HY) -1200 + (ID) 150
Total energy: -908.0 ( -26.71 by residue)
QMean score : 0.710
(partial model without unconserved sides chains):
PDB file :
Tito_2K0Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K0Q-query.scw
PDB file :
Tito_Scwrl_2K0Q.pdb
: