Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKILFFGEPLIRITPKENDYFADSISTKLFYGGSEVNTARALQGFGQDTKLLSALPNNPIGNSFLQFLKAQGIDTHSIQWVGER---VGLYFLEDSFACRKGEVVYDRDHSSLHDFRINQ---IDFDQLFEGVSLFHFSGITLSLDESIQEITLLLLKEAKKREITISLDLNFRSKLISPKNAKILFSQFA---TFADICFGIEPLMVDSQDTTFFNRDEATIEDVKERMIS-LINHFDFQVIFHTKRLQDEWGRNHYQAYIANRKQEFVTSKEITTAVNQRIGSGDAFVAGALYQLLQHSDSKTVIDFAVASASLKCALEGDNMFETVTAVNKVLNQSK-DIIR |
| 3KTN Chain:A ((4-338)) | --KIAAFGEVMLRFTPPEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGI---SDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSA--FGISEAKDYDFEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVEL--LGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTRSHSQ-NQNYLSGYLYT-QNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDIPLTTVKQVNHVLEHPNIDLIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183498 for 2700 contacts (-68.0/contact) +
2D Compatibility (PS) -34456 + (NN) -10190 + (LL) 468
1D Compatibility (HY) -21600 + (ID) 4900
Total energy: -254176.0 ( -94.14 by residue)
QMean score : 0.538
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