Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQQYFVNGEAGAYVTIEDKDTIKHMFNVMRLTEDDQVVLVFDDAIKRLAKVVDSSAH--RFQILEELDNNVEMPVQVTIASGFPKGDKLDFVTQKATELGAAAIWGFPADWSVVKWDGKKLAKKEDKLAKIALGAAEQSKRNRLPQVRLFEKKADFQAELAGFDKIFIAYEESAKEGELSALAQNLQTVKAGDKLLFIFGPEGGISPKEIAAFEEVGAIKVGLGPRIMRTETAPLYALSVISYSAELL |
| 1NXZ Chain:A ((21-236)) | -----------------SEDAANHVARVLRMTEGEQLELFDGSNHIYPAKIIESNKKSVKVEILGRELADKESHLKIHLGQVISRGERMEFTIQKSVELGVNVITPLWSERCGVKLDAERMDKKIQQWQKIAIAACEQCGRNIVPEIRPLMKLQDWCAENDGALKLNLHPRAHYS-------IKTLPTIPAGGVRLLI-GSEGGLSAQEIAQTEQQGFTEILLGKRVLRTETASLAAISALQICFGDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NXZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 55890 for 1518 contacts (36.8/contact) +
2D Compatibility (PS) -21325 + (NN) 6012 + (LL) 2112
1D Compatibility (HY) 8800 + (ID) 850
Total energy: 50639.0 ( 33.36 by residue)
QMean score : 0.060
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