Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIMGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEESGNFGFDRLAELVKEYKVDKFVVGLPKNMNNTSGPRVEASQAYGDKITELFNLPVEYQDERLTTVQAERMLVEQADISRGKRKKVIDKLAAQLILQNYLDRMF
1OVQ Chain:A ((5-136))
--LLAFDFGTKSIGVAVGQRITGTARPLPAIK--AQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY-RALNKGKVDSASAVIILESYFEQGY
General information:
TITO was launched using:
RESULT:
Template:
1OVQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61165 for 923 contacts (-66.3/contact) +
2D Compatibility (PS) -13876 + (NN) -1750 + (LL) 408
1D Compatibility (HY) -11200 + (ID) 2200
Total energy: -89783.0 ( -97.27 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_1OVQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OVQ-query.scw
PDB file :
Tito_Scwrl_1OVQ.pdb
: