Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGFTDETVRFRLDDSNKVEI-SETLTAVYRSLEEKGYNPINQIVGY----VLSGDPAYVPRYNDARNQIRKYERDEIVEELVRYYLQGNGIDL
1MWK Chain:A ((235-297))
-------LKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEFSGYTHVMVIGGGAELICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIGN
General information:
TITO was launched using:
RESULT:
Template:
1MWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -424 for 265 contacts (-1.6/contact) +
2D Compatibility (PS) -5844 + (NN) 1481 + (LL) 300
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -10187.0 ( -38.44 by residue)
QMean score : 0.015
(partial model without unconserved sides chains):
PDB file :
Tito_1MWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MWK-query.scw
PDB file :
Tito_Scwrl_1MWK.pdb
: