Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKEQYFYFRQLDDFKHFTIEQFDHIVSHIKHRTALKNHTLFFEGDYREKLFLIQSGHVKIEQSDASGSFIYTDYVRQGTVFPYGGLFLDD--DYHFSAVAITDIEYFSLPMALYEEYSLQNINQMKHLCRKYSKLLRVHEIRLRNMVTSSASMRVIQSLATLL--LQVPTERG-HLPFPITTIEIANMSGTTRETVSHVLKELRQKDIVEMKGKKLLYNNKNYFKKFIE
3LA7 Chain:A ((50-230))
-------------------------------------RNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAFTPVELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITIDLKLSHQAIAEAIGSTRVTVTRLLGDLREKKMISIHKKKITVHK---------
General information:
TITO was launched using:
RESULT:
Template:
3LA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83153 for 1266 contacts (-65.7/contact) +
2D Compatibility (PS) -19394 + (NN) -8548 + (LL) 3972
1D Compatibility (HY) -13600 + (ID) 2400
Total energy: -123123.0 ( -97.25 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_3LA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LA7-query.scw
PDB file :
Tito_Scwrl_3LA7.pdb
: