Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYK--ERSQETI-FTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGPKGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEALEALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK
1HJP Chain:A ((1-203))MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKG----LHGDLF------------DAEQEAVAALVALGYKPQEASRMVSKIARP-DASSETLIREALRAAL-


General information:
TITO was launched using:
RESULT:

Template: 1HJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 792 -17722 -22.38 -96.84
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -22.38
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.592

(partial model without unconserved sides chains):
PDB file : Tito_1HJP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HJP-query.scw
PDB file : Tito_Scwrl_1HJP.pdb: