Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRLVKQEYVLDGLDCSNCARKIENGVKGIKGINGCAVNFAASTLTVSADGKEEQWVTNKVEKKVKSIDPHVTVRQKHIKKSADDGYRNRMVNMLIRMA-AAVILGAAAYLVQSGTIEFFLFLGAY--LIIGGDIIIRAVKNIIRGQVFDEHFLMALATIGAFLIQQ-------------YPEGVAVMLFYQIGELFQGAAVSRSRKSISALMDIRPDYANLKTKNGIE-QVSSEDVQTGDIIVVNPGESIPLDGKVVQGSAMVDTSALTGESVPRKAAEGQDVMSGFINQNGVLHIEVTKGYQESAVSKILDLVQNASSRKARTENFITKFAKYYTPAVVIIAVLLAFVPPLVLSGAALSDWVYRALIFLVISCPCALVVSIPLGFFGGIGAASKAGVLVKGSNYLEALNQVKYAVFDKTGTLTKGSFEVTEIKPAEGFTKDRLLEAAAYAELHSQHPIAES-VRKAYGKMLSSDEIESYEEISGHGIFAKVNGTEILAGNKKLME------REQIE---DVPDENAGTIVHVAVDQRYAGAIIIADEIKEDAAQAVADLKSLGIKQTAMLTGDSKQTGEAVGKQLGIGEVYAELLPQDKVAQVEALEAKLLPSEKLIFVGDGINDTPVLARADIGVAMGGLGSDAAVEAADIVLMTDQPSKIAEAIRIAKRTRRIVWQNIGFALGVKAIFLILGAFGIATMWEAVFSDVGVTLLAVANAMRVMRLKNK
3J09 Chain:A ((24-693))-----------GMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFET--IKRVIEDLGYGVVDEQAAV--SAEVEHLSRMKRKLYVAAFAGVLLLFLAHFISLPYEDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTA-VVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAI-SAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGDERE-LLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVA--DG--ILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIK-VGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK----EVVAFVGDGINDAPALAQADLGIAVGS-GSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL-IYNVILIPAAAGL------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3J09.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3547 -4882 -1.38 -7.59
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -1.38
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.360

(partial model without unconserved sides chains):
PDB file : Tito_3J09.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J09-query.scw
PDB file : Tito_Scwrl_3J09.pdb: