Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNGQTPARHYYKKLVPSLILILNCIQFLSHPTKADPILLAFVFAVYLAFIWIIPYVASTAVSLSIFIGLWLLTDFFWAVSGQEQGAAYFLIVFLMIYAAFRLPSRLSLIFTACLIGGNILLLSSQGGSLNTIISNISIMLGLYVLFSSMRFRREARREAERNHAELAKMHVQLEHAHKELQKAHAELQEASVLSLRYAVLEERTRIARDIHDSIGHELTSVIVQLQSLPYILKSSKEDSEKVIQNVLSVARECLQEVRSVVHQMGRSESMVGLTALRGLIHQVEERSGLHVSLDTAGL----SEESWPPNVS----ETIYRILQEALTNIIRHADASHAAAVISNDKSHLYVTITDDGQFTG-SLTYGFGLTGMKERAEKAGGSLTFSAVQPSGLKIELSLPLMTTNKEQKDEQR
3EHF Chain:A ((9-193))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVS------SMKGIRLKDELIN-------IKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGE-----HGLLGMRERLEFANGSLHIDT--ENGTKLTMAIP-------------


General information:
TITO was launched using:
RESULT:

Template: 3EHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 520 4730 9.10 27.99
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 9.10
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.398

(partial model without unconserved sides chains):
PDB file : Tito_3EHF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EHF-query.scw
PDB file : Tito_Scwrl_3EHF.pdb: